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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792699.1_cds_XP_016513693.1_2548
CDS Infomation

[gene=LOC107830587] [db_xref=GeneID:107830587] [protein=tubulin alpha-3 chain-like] [protein_id=XP_016513693.1] [location=complement(join(141160..141816,141966..142336,142432..142666,143590..143682))] [gbkey=CDS]
Sequence

ATGAGGGAGTGCATTTCCATTCACATTGGCCAGGCCGGTATTCAGGTCGGCAATGCTTGC
TGGGAACTTTACTGCCTCGAACATGGCATTCAGCCTGATGGGCAGATGCCAAGTGATAAG
ACTGTTGGGGGAGGTGATGATGCCTTCAATACATTTTTCAGCGAAACCAGTTCAGGGAAG
CACGTTCCTCGAGCCGTCTTTGTTGATCTTGAGCCCACTGTTATTGATGAAGTGAGAACT
GGAACGTATCGTCAGTTATTTCACCCTGAACAATTGATCAGTGGCAAAGAAGATGCTGCC
AATAACTTTGCACGAGGCCACTATACAATTGGAAGGGAGATAGTTGATCTTTGCTTGGAT
CGTATCAGAAAGCTCGCAGACAGCTGCACTGGTCTGCAGGGTTTTCTGGTCTTTAATGCC
GTTGGTGGAGGCACTGGTTCTGGTTTGGGTTCACTTCTGTTAGAACGCTTGTCAGTGGAC
TATGGAAAAAAATCCAAGCTTGGCTTTACTGTGTATCCCTCTCCTCAGGTTTCAACCTCT
GTGGTGGAGCCATACAATAGTGTTCTCTCAACCCACTCCCTCCTTGAACACACAGATGTT
TCTATCTTGCTTGATAATGAAGCAATTTATGACATTTGTCGTCGCTCCCTTGACATTGAA
CGCCCCACCTATACCAACTTGAACCGACTTGTCTCTCAGGTGATCTCATCCCTGACTGCT
TCTTTACGGTTTGATGGCGCGTTGAATGTTGATGTGAATGAATTTCAGACTAACCTGGTC
CCATACCCAAGGATCCACTTCATGCTTTCATCTTATGCCCCGGTTATATCAGCTGAGAAG
GCTCATCATGAACAACATTCCGTGGCAGAAATCACCACTACTGCTTTTGAACCAGCTTCT
ATGATGGCTAAGTGTGATCCACGTCGTGGCAAGTACATGGCATGTTGCCTGATGTATCGA
GGGGATGTGGTGCCCAAGGACGTGAATGCTGCTGTATCCATTATTAAAACCAAGCGTAGC
ATTCAGTTTGTTGATTGGTGTCCCACAGGCTTTAAGTGTGGTATCAATTACCAGACTCCA
ACTGTTGTTCCCGGAGGCGATTTGGCCAAGGTACAGAGAGCAGTGTGTATGATATCCAAT
TCCACCAGTGTTGCAGAGGTTTTCTCAAGAATCGACCACAAGTTCGATCTAATGTATGCT
AAGAGAGCCTTTGTTCATTGGTATGTTGGTGAAGGCATGGAGGAAGGTGAATTTTCTGAA
GCACGCGAGGATCTTGCTGCACTTGAGAAAGATTATGAGGAGGTGGGTGCTGAGTATGGG
CAGGGTGAAGAGGGTAGTGAAGGAGAAGAGTACTGA

Peptide Sequence

PEP ID

XP_016513693.1
PEP Infomation

PREDICTED: tubulin alpha-3 chain-like [Nicotiana tabacum]
Sequence

MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETSSGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGREIVDLCLD
RIRKLADSCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAHHEQHSVAEITTTAFEPAS
MMAKCDPRRGKYMACCLMYRGDVVPKDVNAAVSIIKTKRSIQFVDWCPTGFKCGINYQTP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEYGQGEEGSEGEEY

Transcript Sequence

Gene sequence data has not been registered.